Genetics of Breast Cancer
This page gives an entry point to this complicated area of study.
The 'OMIM' and 'Ensemble'
links (there are many more genetics databases available) provide a gateway to the vast world of human genetics.
The two most common genetic risk factors for breast cancer
are the BRCA1 & 2 genes. There are many others that individually account for
a tiny proportion of familial breast cancers.
BRCA1 & BRCA2
- Approximately 5% of all breast cancers are caused by a recognised specific
genetic predisposition due to germ line mutations of one of two different
genes:
- BRCA1 located on Chromosome 17q (OMIM 113705) and/or Ensembl ref
- BRCA2 located on Chromosome 13q (OMIM 600185) and/or Ensembl ref
- Genetic instability is characteristic of BRCA1 & BRCA2-deficient cells, which accumulate broken and
deformed chromosomes as they divide.
- BRCA1/2 is responsible in around 25% of those families with a high incidence of breast cancer:
- The proportion of breast cancer cases in the general population due to BRCA1 mutations ranges from 5.3% for <40 years old, to 1.1% for between 50 and 70 years old
- Mutations are found in a high percentage (about 45%) of families with breast and ovarian tumors
- The mutation rate in families with only breast cancer have a lower percentage and ranges from 15% (for families with three breast cancers) to 25–35% (for families with more than five breast cancers)
- The ratio of the prevalence of BRCA1 to BRCA2 mutations in the general population is about 2:1
BRCA1:
- BRCA1 mutations also predispose to carcinoma of the ovary and possibly
carcinoma of the Fallopian tube
- Mutations of this gene are particularly common in Ashkenazy Jews (2%)
- The risk of developing breast cancer among carriers is around 55% by age 70
- The product of BRCA1 is a cell cycle regulated phosphoprotein that can be
detected immunohistochemically. Its known functions are:
- Transcriptional regulation
- DNA damage repair
- Cell cycle checkpoint control
- Ubiquitination
- Chromatin remodelling
- Morphologically, BRCA1-associated breast cancers frequently show
medullary-like features:
- ER-poor or ER-negative
- PGR-negative
- Her-2 negative
- P53-positive (77% v 35% for sporadic cancers)
- CK 5/6 (and other markers of basal phenotype)-positive
- In so called triple negative breast cancers (ER, PGR & Her-2 negative)
BRCA1 mutations may be seen in up to 20% of cases
- They express cell cycle proteins cyclins A, B1 and E and SKP2
Selected views of an example of a BRCA1-associated breast cancer
Click on images for further detail
BRCA2:
- The product of BRCA2 is involved in controlling gene function and DNA repair:
- Gene function:
- Involved in transcriptional activation and may well act in concert with the product of BRCA1
- Involved in the completion of cell division by cytokinesis
- DNA repair:
- BRCA2 gene promotes homologous recombination, a major pathway of DNA double-strand break repair
- The majority of BRCA2-associated tumors are invasive ductal, no special-type tumours
- There is an assosciation with families who develop male breast cancers
- Morphologicaly they are more likely to have pushing tumour margins
- Usually high grade
- More commonly show a luminal phenotype
- More commonly ER-positive - similar to sporadic breast cancers
- P53-positive (45% v 35% for sporadic cancers)
- Express cell cycle proteins cyclin D1 and p27
For a detailed breakdown of clinico-pathological assosciations between BRCA breast cancers compared with sporadic cancers see the linked table adapted from
Eerola et al. Breast Cancer Research 2008 10:R17 doi:10.1186/bcr1863
The linked immunophenotype expression profile is acknowledged from Honrado et al (2005) with permission from the Nature Publishing Group.
Testing for BRCA1 & 2
- There is a wide range of molecular-genetic tests for BRCA1 and BRCA2 cancer-predisposing mutations
- These techniques are expensive, complex and time consuming due to the large size of both genes
- For this and other reasons, such as the absence of hotspots for mutations, it is necessary to select liklely candidate families for testing
- Selection based on clinical criteria alone is being superseded using our additional knowledge of gene function and indicative pathological phenotyping
Ataxia telangiectasia mutation (ATM)
This is a very uncommon cancer-associated hereditory condition which is associated with
familial breast cancer. There are no specific morphological or immunophenotypic features in the
pathology of these breast cancers to suggest the diagnosis which is usually made clinically.
- Ataxia telangiectasia mutation (ATM) is located on Chromosome 11 (OMIM 208900, 607585) Ensembl ref
- Autosomal recessive genetic instability syndrome characterised by:
- Neurodegenration
- Oculocutaneous telangiectasia
- Immune defects
- Cancer predisposition
- ATM protects genome stability via key roles in the response to DNA double
strand breaks:
- An early transducer in pathways that activate cell cycle checkpoints
promoting replication of cells with damaged DNA
- BRCA1 & P53 are both directly and indirectly activated by ATM
Hereditary breast cancers not attributable to BRCA1/2 mutations
- Have phenotypic similarities to BRCA2 tumors
- Tend to be of lower grade and proliferation index than those associated with BRCA1/2
- Are rarely associated with somatic mutations in the BRCA genes
Prognosis